November 1, 2023
15 min

20 Best Ecommerce Automation Softwares in 2024 (To Save Time)

Discover how implementing ecommerce automation software can streamline your business workflows, reduce errors, and improve customer experiences
20 Best Ecommerce Automation Softwares in 2024 (To Save Time)
Table of contents

Running an ecommerce business involves many intricate operations including inventory management, order processing, accounting, customer service, and more. 

As your online store grows, these complex manual tasks can quickly become overwhelming for staff. The solution is to implement ecommerce automation software and tools to streamline critical business workflows.

Automating repetitive, time-intensive processes allows your employees to focus their efforts on high-value strategic initiatives that drive business growth.

With the right solutions in place, you can reduce errors, gain data-driven insights, and deliver exceptional customer experiences.

Key Takeaways from this Post

Implementing ecommerce automation software and tools can streamline critical business workflows and free up employee resources to focus on strategic initiatives.
With the right solutions in place, businesses can reduce errors, gain data-driven insights, and deliver exceptional customer experiences.
Link My Books provides integrated accounting automation for ecommerce sellers, ensuring accurate financials, time savings, actionable insights, simplified taxes, and seamless scalability.
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Best Ecommerce Automation Softwares & Tools

In no particular order here are our 20 Best eCommerce Automation Software & Tools to help you streamline your eCommerce processes and overtake the competition.

Marketing Automation:

  • HubSpot: For comprehensive inbound marketing, including social media, emails, SEO, and CRM.
  • Mailchimp: Predominantly for email marketing automation and related campaigns.
  • Omnisend: Specialized for omnichannel marketing, combining email, SMS, push notifications, and more.

Sales & CRM:

  • Salesforce: A powerful tool for sales management, customer service, marketing automation, and partner relationship management.
  • Zoho CRM: Offers a range of applications for business strategy, sales and marketing, IT, and a dedicated CRM tool.

Inventory Management:

  • QuickBooks Commerce: Inventory management software for e-commerce and wholesalers.
  • Stitch Labs: Helps with inventory, orders, and data across multiple channels.

Order & Shipping Management:

  • ShipStation: Efficiently manages shipping processes with order tracking and batch label creation.
  • ShippingEasy: Streamlines the shipping process and offers automation for labels, rates, and more.

Multi-channel Management:

  • Sellbrite: Enables brands & retailers to list and sell products effortlessly across multiple online sales channels.
  • ChannelAdvisor: Provides cloud-based e-commerce solutions that enable retailers to integrate, manage, and optimize their merchandise sales across hundreds of online channels.

Accounting & Finance:

  • QuickBooks Online: For handling business accounts and finances, including sales, receipts, payments, and payroll.
  • Xero: Online accounting software for small businesses, offering services like invoicing, payroll, inventory, etc.
  • Link My Books: Used to enhance eCommerce bookkeeping tasks simplifying complicated processes through clever automation

P.S. If you’re on the hunt for the best eCommerce accounting software, look no further. 

Customer Service:

  • Zendesk: Offers a range of service solutions, including help desk, chat, call center, and knowledge base.
  • Freshdesk: Provides customer support, including ticketing, self-service options, and customer engagement tools.

Ecommerce Platform Automation:

  • Shopify Flow: Exclusive for Shopify Plus users, automating tasks within the Shopify platform.
  • BigCommerce: Offers a range of integrated e-commerce tools and capabilities for automation.

Workflow Automation:

  • Zapier: Connects your favorite apps, automates tasks, and optimizes workflows.
  • IFTTT: Allows the creation of chains of simple conditional statements, called applets, which are triggered based on changes to other web services.

20 Best eCommerce Automation Software

Software are ordered by their function and not an overall ranking!

Link My Books the Best Accounting Solution for eCommerce Sellers

happy customers

In the realm of ecommerce, managing finances, particularly accounting, remains a significant challenge for many entrepreneurs. Link My Books serves as a beacon in this complex task, simplifying the intricate aspects of ecommerce accounting

Designed specifically for ecommerce businesses, Link My Books automates the transfer of sales data from various channels like Amazon, eBay, and Shopify directly into accounting software such as Xero or QuickBooks. 

This seamless integration not only ensures accuracy but also provides real-time financial insights, allowing businesses to focus more on growth and less on spreadsheets.


Link My Books is laden with features designed to streamline the accounting process for ecommerce entities. Here are the core features, each bringing a unique benefit to the table:

Automated Data Transfer

Say goodbye to manual entries as all sales data is automatically transferred to your now automated accounting software, ensuring transactions are always up-to-date.

Sales Breakdown

Understand your revenue streams better with detailed insights into each sale. Know where your money comes from - be it direct sales, marketplace fees, or overseas transactions.

Expense Tracking

Keep a close eye on outgoing funds. From shipping costs to transaction fees, track every penny spent to manage your budget effectively.

Tax Compliance

With rules varying by region and country, tax compliance is a breeze with Link My Books, ensuring you meet all legal requirements and avoid unnecessary penalties.

Multi-Currency Support

Conduct business globally without currency woes. Link My Books handles all currency conversions, so your books remain consistent and accurate.

Customized Reporting 

Get reports tailored to your business needs, helping you make informed decisions based on reliable financial data.


Time Savings

One of the most tangible benefits of Link My Books is the amount of time it saves. By automating data entry and complex calculations, it frees up countless hours that would otherwise be spent manually updating accounting records. This efficiency allows business owners to reallocate precious time to other aspects of their business, such as planning growth strategies, or improving customer service.


In accounting, accuracy is non-negotiable. Link My Books significantly reduces human error by automating the data transfer process. It ensures that sales figures, expenses, and fees are recorded down to the last cent, providing business owners with peace of mind and confidence in their financial statements.

Financial Insights

Beyond the numbers, Link My Books offers valuable insights into a business's financial health. Customized reports help track performance indicators, identify trends, and uncover areas for cost reduction. These insights are crucial for informed decision-making and strategic planning.

Simplified Tax Compliance

Tax time is often a source of stress for ecommerce businesses due to various regulations and the potential for costly mistakes. Link My Books simplifies this process, automatically categorizing transactions in compliance with tax laws. This precision ensures businesses only pay what they owe and nothing more.


As businesses grow, so do their financial complexities. Link My Books is designed to scale with your business, accommodating increased sales volume, additional marketplaces, and more diverse revenue streams without compromising performance.

HubSpot the Best All-In-One Marketing Automation Platform

hubspot logo

HubSpot is an inbound marketing, sales, and service software platform. It provides tools to help grow website traffic, generate leads, close sales, and retain customers. HubSpot is ideal for SMBs and enterprises needing an all-in-one marketing, sales and service solution.


  • Website builder, CRM, and marketing automation
  • Email, live chat, meetings tools
  • Social media management and publishing
  • SEO, blogging, and landing pages
  • Lead and deal tracking
  • Reporting and analytics


  • Increases website traffic and conversions
  • Automates and improves marketing
  • Aligns sales and marketing with shared data
  • Enhances customer engagement and support

Zendesk the Best Omnichannel Customer Service Automation

zendesk logo

Zendesk provides customer service and engagement software designed to improve customer relationships. It enables omnichannel customer support and help desk capabilities for companies of all sizes.


  • Email, social, chat, voice support channels
  • Knowledge base and self-service portal
  • Ticketing system and workflow automation
  • Agent desktop and collaboration tools
  • Reporting and analytics


  • Unifies customer support interactions
  • Improves customer satisfaction
  • Increases agent productivity
  • Provides insights to enhance operations

ShipStation the Best Shipping Process Automation for High Volume

ShipStation is a shipping management software for ecommerce businesses. It helps simplify order fulfillment across shopping carts, marketplaces, and carriers. ShipStation is designed for SMBs and high-volume shippers.


  • Automated order import and processing
  • Multi-carrier shipping rate comparison
  • Customizable shipping workflows
  • Automated printing, packing, and tracking


  • Accelerates order fulfillment
  • Reduces shipping costs
  • Eliminates manual data entry
  • Provides branded tracking experience

Mailchimp the Best Email Marketing Automation for Small Businesses

mailchimp logo

Mailchimp is an email marketing automation platform designed for small businesses. It simplifies creating, sending, and tracking email newsletters and campaigns.


  • Intuitive drag-and-drop email builder
  • Pre-built templates and customizable design
  • Automated workflows and triggers
  • Contact management and segmentation
  • Detailed analytics and reporting


  • Makes professional email campaigns easy
  • Automates repetitive marketing tasks
  • Provides insights to boost engagements
  • Flexible pricing for small business budgets

Salesforce the Best Enterprise CRM Automation Platform

salesforce logo

Salesforce is a cloud-based CRM platform that streamlines sales, marketing, customer service, and other business processes in a single solution. It's designed for businesses of all sizes.


  • Contact and lead management
  • Opportunity tracking and pipeline
  • Sales automation and forecasting
  • Marketing campaign management
  • Customer service and support tools
  • Robust analytics and reporting


  • Unifies sales, marketing and service data
  • Increases sales rep productivity
  • Enhances marketing ROI with insights
  • Improves customer satisfaction
  • Easy to use with scalable pricing

Omnisend the Best Omnichannel Marketing Automation for eCommerce

Omnisend is an omnichannel marketing automation platform tailored for ecommerce brands. It combines email, SMS, web push, and more in one solution.


  • Drag-and-drop campaign builder
  • Automated lifecycle campaigns
  • Advanced segmentation
  • Real-time order tracking
  • Detailed analytics


  • Orchestrates unified cross-channel campaigns
  • Increases customer engagement and loyalty
  • Automates repetitive tasks to save time
  • Provides data-driven insights for optimization
  • Designed specifically for ecommerce

QuickBooks Commerce the Best Multichannel Inventory Management Automation

QB logo

QuickBooks Commerce is inventory and order management software designed for wholesalers, distributors, and ecommerce brands. It provides visibility and control across multichannel sales.


  • Centralized inventory and order data
  • Purchase orders and supplier management
  • Barcode scanning and batch inventory updates
  • Warehouse and logistics management
  • Custom reporting and analytics


  • Unified view of inventory across all channels
  • Automates order processing workflows
  • Eliminates overselling and stockouts
  • Optimizes inventory costs and turnover

Stitch Labs the Best Omnichannel Order Management Automation

Stitch Labs provides omnichannel inventory management, order management, and business intelligence software for high-growth brands.


  • Unified multichannel inventory
  • Real-time inventory tracking
  • Order processing workflows
  • Demand forecasting and analytics
  • 3PL logistics integrations
  • Custom reporting


  • Consolidates inventory and orders
  • Optimizes stock levels using analytics
  • Automates fulfillment workflows
  • Increases efficiency and reduces errors
  • Scales easily with business growth

ShippingEasy the Best Shipping Automation for Small Business

ShippingEasy provides an automated shipping management solution for ecommerce businesses. It reduces fulfillment costs while providing tracking and delivery notifications.


  • Discounted USPS and UPS rates
  • Automated order importing
  • Multi-carrier label printing
  • Tracking emails and delivery notifications
  • Refund management and analytics


  • Saves on shipping costs
  • Accelerates fulfillment efficiency
  • Eliminates manual data entry
  • Provides delivery visibility

Sellbrite the Best Multichannel Sales Management Automation

Sellbrite is a multichannel ecommerce management platform that helps brands list, fulfill, and track orders from all their sales channels in one dashboard.


  • Centralized inventory sync
  • Automated order routing
  • Unified order management
  • Customer CRM and segmentation
  • Custom analytics and business intelligence


  • Manages multiple sales channels
  • Automates order processing
  • Prevents overselling stock
  • Provides data insights for optimization

ChannelAdvisor the Best Multichannel Marketplace Expansion Automation

ChannelAdvisor is an ecommerce platform designed to help retailers expand their online reach and operations through hundreds of integrated channels and marketplaces globally.


  • Marketplaces integration
  • Digital marketing automation
  • Global platform with localization
  • Advertising campaign management
  • Robust analytics and reporting


  • Expands reach to new markets and geographies
  • Connects inventory, orders and fulfillment
  • Automates and optimizes digital marketing
  • Provides actionable data to boost sales

QuickBooks Online the Best Accounting Automation for Small Business

qb logo

QuickBooks Online is an accounting software for small businesses to manage income, expenses, payroll, taxes, and reporting all in one place.


  • Income and expenses tracking
  • Invoicing, payments and billing
  • Payroll, 1099 contractors, and benefits
  • Tax preparation and filing
  • Custom reporting and analysis


  • Automates accounting workflows
  • Easy collaboration with accountants
  • Manages payroll in one place
  • Simplifies tax filing and payments
  • Scales from 1 to 100+ employees

Xero the Best Accounting Automation for Growing eCommerce

xero logo

Xero is an online accounting software for small businesses offering tools for invoicing, expense claims, inventory, financial reporting, and more.


  • Streamlined invoicing
  • Bank reconciliation
  • Inventory management
  • More than 800 app integrations
  • AI-powered analytics


  • Automates accounting processes
  • Real-time financial insights
  • Seamlessly integrates with banks
  • Ecosystem of apps extend functionality
  • Affordable pricing plans

Zapier the Best No Code Automation Across Apps

zapier logo

Zapier is a workflow automation tool that connects apps via customizable integrations called Zaps. It allows users to automate workflows without coding.


  • 2500+ app integrations
  • Multi-step Zaps with logic
  • Scheduled and chained workflows
  • Conditional filtering
  • Monitoring and error handling


  • Automates processes between web apps
  • Builds workflows without programming
  • Scales from simple to complex tasks
  • Boosts productivity and efficiency

IFTTT the Best Simple Task Automation

IFTTT (If This, Then That) is a free automation service that creates chains of simple conditional statements between apps and devices.


  • Applets with if-this-then-that logic
  • Connections with web services, IoT
  • Location, time, event triggers
  • Monitoring for errors
  • Large ecosystem of supported services


  • Easy to automate basic tasks
  • Great for simple cause-and-effect workflows
  • Requires no technical skills
  • Seamless connectivity across services

Zoho CRM the Best for Customizable Business Automation

Zoho CRM offers a range of applications designed to help businesses attract, retain, and satisfy customers to grow their business.


  • Sales automation tools like lead and contact management
  • Marketing automation for campaigns
  • Customer service and support applications
  • Business process management
  • Conversational AI assistant Zia
  • Reporting, analytics, and dashboards


  • Automates daily sales, marketing, and service activities
  • Highly customizable to align with business needs
  • Omnichannel customer engagement capabilities
  • Provides data-driven insights to optimize strategies
  • Affordable pricing tailored for SMBs

Freshdesk the Best for SMB Customer Support Automation

FreshBooks logo

Freshdesk by Freshworks is a cloud-based customer support software and helpdesk solution designed for SMBs.


  • Multi-channel ticket management
  • Knowledge base and self-service portal
  • Automated ticket routing
  • Team collaboration features
  • Multiple support plan options


  • Affordable customer support automation
  • Deflects common tickets through self-service
  • Increases support team productivity
  • Improves customer satisfaction
  • Enables scaling up support capabilities

Shopify Flow the Best for Automating Shopify Store Workflows

Shopify Flow provides process automation natively within Shopify stores to optimize workflows and operations.


  • Library of pre-built automations
  • Customizable workflows and triggers
  • Connects with other Shopify apps
  • Data filters and conditional logic
  • Reporting and analytics


  • Automates repetitive Store tasks to save time
  • Creates personalized customer experiences
  • Streamlines order processing workflows
  • Boosts efficiency and productivity
  • Improves data accuracy

BigCommerce the Best for Built-In Ecommerce Automation

BigCommerce is an ecommerce platform providing built-in tools and capabilities for automation, customization, and multi-channel selling.


  • Native automation for orders and shipping
  • Email and SMS campaign builders
  • ROLE-based access controls
  • APIs for customization and integration
  • Multi-currency and language support


  • Automates core ecommerce workflows
  • Facilitates omnichannel digital marketing
  • Flexible role-based access control
  • Extensible via APIs and apps
  • Supports global customer base

How to Select the Best Ecommerce Automation Software


With the wide variety of automation tools now available, it's important to carefully assess your business' specific needs and priorities to determine the right solutions to implement.

Here is a methodology to follow when evaluating and selecting ecommerce automation software:

Step 1 - Analyze Current Processes and Pain Points

Conduct an in-depth analysis of your existing ecommerce operations and workflows. Identify the most frequent and time-consuming manual processes involved with order processing, inventory, shipping, accounting, customer service, marketing, and other key areas. This will reveal where automation can drive the greatest business impact.

Step 2 - Prioritize Automation Needs

With the top pain points and manual processes identified, prioritize them based on which will provide the highest potential return on investment when automated. Important factors to consider are time savings, revenue uplift, cost reduction, and improved customer experience. Use this priority framework to determine your most pressing automation needs in both the short and long-term.

Step 3 - Define Technical Requirements

Next, spell out the technical capabilities and integrations required to address those needs, including:

  • Ecommerce platform, accounting, ERP, CRM, and other critical integrations
  • Data and analytics requirements
  • Omnichannel support needs
  • Customization and scalability needs
  • Security protocols and compliance requirements

Step 4 - Research Software Options

With your requirements defined, you can then thoroughly research automation platforms matching your needs and integrate with your existing systems. Narrow down the options to 2-3 solutions for further in-depth evaluation.

Step 5 - Assess Ease of Use

During your software trials, assess the overall user experience and ease of use. The platforms should have an intuitive interface allowing your team to quickly learn and adopt the solution with minimal friction.

Step 6 - Evaluate Support and Resources

Consider the vendor's customer support channels, resources, and overall responsiveness. Comprehensive onboarding, training, documentation, and ongoing support will smooth the adoption process.

Step 7 - Compare Pricing and Costs

Evaluate both short and long-term costs across solutions. Beyond setup fees and recurring subscriptions, factor in costs for add-ons, integrations, and expanded use across your organization when calculating total cost of ownership.

Step 8 - Read User Reviews

Research current and past user reviews to gain unbiased insights into the software's actual performance, benefits, limitations, and potential issues that may not be immediately apparent during trials.

Step 9 - Assess Vendor Viability

Opt for platforms from mature, established vendors with a strong reputation for stellar customer service, reliability, and continuity. Emerging tools can offer innovation but also present risks.

Step 10 - Prioritize Security and Compliance

For software managing critical business transactions and customer data, security is non-negotiable. Be sure solutions offer robust encryption, access controls, and compliance with regulations.

Step 11 - Evaluate Scalability

Ensure the automation platform can smoothly scale up in capacity to support your company's growth without requiring migrations to entirely new systems. Changing solutions can be very disruptive.

By thoroughly evaluating options against these criteria, you can select ecommerce automation software aligned both to your current needs and future goals. This is an important long-term investment that can pay dividends through substantially streamlined operations.

eCommerce Automation Software Compared

| Software Name | Category | Key Features | Benefits | |---|---|---|---| | HubSpot | Marketing Automation | Inbound marketing, social media management, CRM | Comprehensive marketing automation | | Mailchimp | Marketing Automation | Email marketing automation, campaign management | Predominantly for email marketing | | Omnisend | Marketing Automation | Omnichannel marketing, including email, SMS, and push notifications | Specialized for omnichannel marketing | | Salesforce | Sales and CRM | Sales management, customer service, marketing automation | Powerful tool for sales and CRM | | Zoho CRM | Sales and CRM | Business applications, dedicated CRM tool | Range of applications for business strategy | | QuickBooks Commerce | Inventory Management | Inventory management for e-commerce and wholesalers | Streamline inventory and orders across multiple channels | | Stitch Labs | Inventory Management | Inventory, order, and data management across multiple channels | Helps with inventory and order management | | ShipStation | Order and Shipping Management | Shipping processes, order tracking, batch label creation | Efficiently manages shipping processes | | ShippingEasy | Order and Shipping Management | Streamlines the shipping process, including automation for labels | Automates shipping labels and rates | | Sellbrite | Multi-channel Management | Lists and sells products across multiple online channels | Enables effortless listing and selling | | ChannelAdvisor | Multi-channel Management | Provides cloud-based e-commerce solutions | Integrates, manages, and optimizes merchandise sales | | QuickBooks Online | Accounting and Finance | Manages business accounts, sales, receipts, payments, and payroll | Handles business accounts and finances | | Xero | Accounting and Finance | Offers online accounting software for small businesses | Includes invoicing, payroll, inventory, and more | | Link My Books | Accounting and Finance | Automates the transfer of sales data to accounting software | Simplifies and automates e-commerce bookkeeping | | Zendesk | Customer Service | Offers help desk, chat, call center, and knowledge base support | Provides a range of service solutions for customer support | | Freshdesk | Customer Service | Provides customer support, ticketing, and self-service options | Offers customer support and engagement tools | | Shopify Flow | Ecommerce Platform Automation | Automates tasks within the Shopify platform | Exclusively for Shopify Plus users | | BigCommerce | Ecommerce Platform Automation | Offers a range of integrated e-commerce tools and capabilities | Provides automation and customization | | Zapier | Workflow Automation | Connects favorite apps and automates tasks | Automates tasks and optimizes workflows | | IFTTT | Workflow Automation | Creates chains of simple conditional statements | Allows automation of basic tasks |

Automate your ecommerce accounting with Link My Books

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As an ecommerce business, managing your financial data across multiple sales channels can become unwieldy. Issues like inaccurate or duplicate transaction records, scattered data sources, and manual reconciliation of accounts are common pain points. Link My Books provides integrated accounting automation to solve these problems.

Designed exclusively for ecommerce sellers, Link My Books seamlessly connects your sales channels like Shopify, Amazon, eBay, Walmart, and more to your accounting platform. This eliminates manual importing or exporting of sales data.

The integration automatically funnels all transactions from checkout to fulfillment into your QuickBooks or Xero account, ensuring your books are always up-to-date.

Link My Books provides customers with:

Accurate Financials

By automating transaction posting in real-time, Link My Books removes human errors and provides an accurate view of revenue and expenses.

Time Savings

There’s no more wasteful hours spent manually importing data or reconciling discrepancies across channels. You save significant time.

Actionable Insights

With all sales data in one place, you gain clear visibility into your profit margins, cash flow, inventory costs, and other critical financial metrics.

Simplified Taxes

Automated transaction categorization streamlines sales tax calculations, 1099 forms, and overall compliance.

Seamless Growth

Easily scale beyond 7 or 8 figure revenue without disruption. Link My Books grows with your expanding business.

By eliminating disjointed accounting data and manual processes, Link My Books gives ecommerce entrepreneurs the gift of time and confidence in their numbers. Spend less on accounting and more on profitably growing your online business.

Keeping track of all these fees can be overwhelming. Let Link My Books help with understanding and managing your Amazon seller finances. Our bookkeeping service will ensure that all your fees are accurately tracked and accounted for. Start Your Free 14 Day Trial Now!

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